STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61403.1Acetyltransferase, GNAT family. (298 aa)    
Predicted Functional Partners:
CEM61404.1
Glycosyl hydrolase family 3 N-terminal domain protein.
       0.791
trxB
Thioredoxin reductase.
       0.775
CEM62583.1
Polysaccharide deacetylase.
 
     0.752
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.730
CEM61592.1
OmpA family protein.
  
     0.702
CEM62070.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.700
CEM61104.1
Sporulation and cell division repeat protein.
 
     0.695
CEM60724.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.692
BamD
Tetratricopeptide repeat protein.
  
     0.684
CEM62504.1
Tetratricopeptide repeat protein.
  
     0.682
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.