fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM61413.1ABC transporter, ATP-binding protein. (220 aa)    
Predicted Functional Partners:
CEM61412.1
ABC transporter, ATP-binding protein.
  
0.989
CEM61411.1
ABC transporter, permease protein.
  
 0.981
CEM60619.1
ABC transporter, permease protein.
  
 0.976
CEM61410.1
ABC transporter, permease protein (fragment).
 
  
 0.960
oppD
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
  
0.953
CEM62612.1
ABC transporter, ATP-binding protein.
 
    
0.921
lolD-2
Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
    
0.920
CEM63155.1
ABC transporter, permease protein.
  
 0.915
CEM61227.1
Uncharacterized ABC transporter ATP-binding protein TM_0352.
 
    
0.912
CEM61408.1
ABC transporter, substrate-binding protein, family 5.
 
  
 0.907
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (20%) [HD]