STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61416.1ABC transporter, ATP-binding protein. (577 aa)    
Predicted Functional Partners:
yecC
Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     
0.898
CEM61417.1
Putative ATP synthase F0, A subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    
0.823
CEM60999.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.787
CEM62875.1
Transcriptional regulator, TetR family.
  
   
 0.626
troB
Zinc transport system ATP-binding protein TroB.
 
     
0.608
CEM61479.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.492
CEM61418.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.440
CEM63420.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.413
CEM61482.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.407
CEM63413.1
Leucine carboxyl methyltransferase.
 
     0.402
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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