STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61450.1ABC transporter, ATP-binding protein. (241 aa)    
Predicted Functional Partners:
CEM61451.1
BioY family protein.
 
 0.997
CEM61449.1
Cobalt transport protein.
  
 0.993
CEM62980.1
Cobalt transport protein.
 
 
0.958
CEM61480.1
Cobalt transport protein.
  
 
 0.875
CEM63025.1
Cobalt transport protein.
  
 
 0.875
CEM63399.1
Cobalt transport protein.
  
 
 0.875
CEM61639.1
Putative metal transport system ATP-binding protein TP_0035; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
0.826
CEM63066.1
ABC transporter, ATP-binding protein.
  
     0.767
CEM62296.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
   
 
 0.756
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.727
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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