STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61455.1ABC transporter, ATP-binding protein. (207 aa)    
Predicted Functional Partners:
CEM61456.1
ABC transporter, permease protein.
 
 
 0.988
CEM61457.1
ABC transporter, substrate-binding protein, thiB family.
 
  
 0.973
CEM62155.1
ABC transporter, permease protein.
 
 0.927
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.922
CEM62154.1
ABC transporter, permease protein.
  
 0.921
CEM61412.1
ABC transporter, ATP-binding protein.
 
    
0.914
oppD-2
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
 
    
0.906
CEM62153.1
ABC transporter, solute-binding protein.
  
 0.883
CEM62130.1
ABC transporter, ATP-binding protein.
 
    
0.804
CEM61349.1
ABC-type Fe3+ transport system, permease component.
  
 0.765
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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