STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61457.1ABC transporter, substrate-binding protein, thiB family. (339 aa)    
Predicted Functional Partners:
CEM61456.1
ABC transporter, permease protein.
 
 0.994
CEM61455.1
ABC transporter, ATP-binding protein.
 
  
 0.973
CEM61349.1
ABC-type Fe3+ transport system, permease component.
 
  
 0.762
CEM60445.1
ABC transporter, permease protein.
 
  
 0.680
CEM62629.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.446
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.