Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM61717.1Uncharacterized ABC transporter ATP-binding protein HI_0663. (591 aa)    
Predicted Functional Partners:
cydD
ATP-binding/permease protein CydD.
  
 
 0.949
aapP
Amino-acid transporter subunit; Function of strongly homologous gene; transporter.
 
     
0.895
CEM60737.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
     0.863
CEM61718.1
Putative ABC transporter ATP-binding protein HI_0664; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
0.841
cydB
Cytochrome bd ubiquinol oxidase subunit 2.
  
  
 0.839
yecC
Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     
0.793
cydA
Cytochrome bd ubiquinol oxidase subunit 1.
  
  
 0.786
CEM62324.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.776
pstB
Phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     
0.563
troB
Zinc transport system ATP-binding protein TroB.
 
     
0.503
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (14%) [HD]