STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61734.1Tetratricopeptide repeat protein. (576 aa)    
Predicted Functional Partners:
CEM60435.1
ATPase, AAA family.
  
     0.691
CEM61309.1
TPR repeat-containing protein TP_0095.
 
     0.684
CEM60396.1
TPR repeat-containing protein TP_0920.
 
     0.610
CEM63176.1
Transporter, major facilitator family protein.
  
     0.569
CEM60657.1
LysM domain protein.
  
     0.567
CEM61315.1
IPT/TIG domain protein.
  
     0.544
CEM61733.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.539
BamD
Tetratricopeptide repeat protein.
  
     0.532
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.514
AmrB
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.499
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.