STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61736.1ABC transporter, ATP-binding protein. (267 aa)    
Predicted Functional Partners:
CEM61735.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.941
CEM62612.1
ABC transporter, ATP-binding protein.
   
0.877
CEM61381.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.751
CEM61939.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.650
lolD
Lipoprotein-releasing system ATP-binding protein LolD.
   
0.642
CEM63185.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.634
CEM62903.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
      0.613
CEM63184.1
ABC-2 type transporter.
 
  
 0.589
CEM61220.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.483
troB
Zinc transport system ATP-binding protein TroB.
 
   
0.469
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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