STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CEM61737.1Oxidoreductase, short chain dehydrogenase/reductase family protein. (253 aa)    
Predicted Functional Partners:
CEM60452.1
Peptidyl-prolyl cis-trans isomerase.
  
 
 0.825
CEM61966.1
Rubredoxin.
  
 0.823
atoB
acetyl-CoA acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.819
CEM62891.1
Inosine 5-monophosphate dehydrogenase.
   
 
 0.797
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.795
sbcD
Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
 
 0.787
CEM62587.1
Putative ankyrin repeat-containing protein TP_0502; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.701
CEM63123.1
Ankyrin repeat protein.
   
 0.701
crt
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.669
CEM61005.1
Pyridine nucleotide-disulfide oxidoreductase (fragment).
  
 
 0.652
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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