STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61481.1Putative ABC transporter ATP-binding protein TDE_0282; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (487 aa)    
Predicted Functional Partners:
CEM61480.1
Cobalt transport protein.
 
 
 0.976
CEM61482.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.940
CEM63399.1
Cobalt transport protein.
 
 
 0.899
CEM63025.1
Cobalt transport protein.
 
 
 0.898
CEM63027.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.778
CEM63400.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.778
CEM61479.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.728
CEM62980.1
Cobalt transport protein.
 
 
0.681
CEM60999.1
Hypothetical protein; No homology to any previously reported sequences.
     0.615
CEM61449.1
Cobalt transport protein.
  
 
 0.570
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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