STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llaDCHIAModification methylase LlaDCHIA. (284 aa)    
Predicted Functional Partners:
CEM61500.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.944
CEM60499.1
Putative DNA (cytosine-5-)-methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.817
CEM61502.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.755
yhfW
Putative mutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
      0.640
yhfX
Putative amino acid racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
      0.637
CEM60501.1
Cytosine-specific methyltransferase NlaX (fragment).
    
 0.587
php
Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    
 0.529
CEM61497.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.523
CEM61498.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.522
CEM61499.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.518
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.