Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CEM61504.1Methyltransferase domain protein (fragment). (132 aa)    
Predicted Functional Partners:
CEM61505.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM61506.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CEM61507.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.701
CEM61508.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.701
repA
Replication initiator protein A, N-terminal domain protein.
 
     0.678
CEM61509.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.656
CEM61510.1
Hypothetical protein; No homology to any previously reported sequences.
       0.656
CEM61511.1
Hypothetical protein; No homology to any previously reported sequences.
       0.656
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
     
 0.427
CEM62393.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
 0.425
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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