Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM61515.1Peptidase, M23 family. (310 aa)    
Predicted Functional Partners:
recJ
Single-stranded-DNA-specific exonuclease RecJ.
       0.816
CEM62048.1
LysM domain protein.
 
   
 0.691
CEM62589.1
Penicillin-binding protein, 1A family.
  
   
 0.664
flaB-2
Flagellar filament 31 kDa core protein; Component of the core of the flagella. Belongs to the bacterial flagellin family.
    
 
 0.617
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
   
 0.594
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
   0.591
rseP
Putative zinc metalloprotease TP_0600; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.440
CEM63214.1
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.423
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.420
rlpA
Sporulation and cell division repeat protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 0.407
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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