STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61515.1Peptidase, M23 family. (310 aa)    
Predicted Functional Partners:
recJ
Single-stranded-DNA-specific exonuclease RecJ.
       0.812
CEM62048.1
LysM domain protein.
 
   
 0.755
flaB-2
Flagellar filament 31 kDa core protein; Component of the core of the flagella. Belongs to the bacterial flagellin family.
    
 
 0.694
CEM62589.1
Penicillin-binding protein, 1A family.
 
   
 0.668
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
   0.630
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
   
 0.604
rlpA
Sporulation and cell division repeat protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 0.459
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.438
rseP
Putative zinc metalloprotease TP_0600; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.426
CEM63214.1
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.424
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.