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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61532.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (230 aa)    
Predicted Functional Partners:
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
  
 0.834
CEM61533.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.813
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
 
 0.731
CEM61007.1
Response regulator receiver domain protein.
  
 
 0.640
CEM61785.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.631
CEM62625.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 
 0.519
CEM62627.1
Stage II sporulation protein E.
  
  
 0.448
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
 
 0.432
CEM63082.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
   0.403
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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