Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM61540.1Sugar-binding domain protein. (322 aa)    
Predicted Functional Partners:
rbsC-2
D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
 0.998
CEM63196.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.974
CEM61801.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.970
mglA-2
Fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.967
CEM61802.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.939
rbsD
Putative cytoplasmic sugar-binding protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.865
rbsC
Function of homologous gene experimentally demonstrated in an other organism; transporter;fragment of D-ribose transporter subunit; membrane component of ABC superfamily (part 1).
 
 
 0.861
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
 
 0.849
rbsA
Sugar ABC transporter, ATP binding protein.
 
 
 0.770
CEM63195.1
Putative ribose/galactose/methyl galactoside import ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.734
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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