Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM61580.1Alpha amylase, catalytic domain protein. (1197 aa)    
Predicted Functional Partners:
CEM62560.1
PTS system, beta-glucoside-specific, IIABC component.
  
  
 0.920
ycaM
Inner membrane transporter YcaM.
   
 0.917
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.885
glgX
Glycogen operon protein GlgX homolog; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.765
CEM61963.1
Putative Protein-N(pi)-phosphohistidine--sugar phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.736
CEM60769.1
Isoamylase N-terminal domain protein.
  
  
 0.703
CEM62629.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.681
CEM60460.1
Putative 4-alpha-glucanotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.671
glgA-2
Glycogen/starch synthase, ADP-glucose type.
  
  
 0.662
CEM61581.1
Endonuclease/exonuclease/phosphatase family protein.
 
  
 0.640
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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