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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61592.1OmpA family protein. (1347 aa)    
Predicted Functional Partners:
CEM60657.1
LysM domain protein.
 
  
 0.866
CEM63036.1
Outer membrane lipoprotein carrier protein LolA.
 
 
 0.844
CEM63211.1
Cyclic nucleotide-binding domain protein.
 
  
 0.820
BamD
Tetratricopeptide repeat protein.
 
  
 0.819
CEM62513.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.793
CEM61816.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.789
cvpA
CvpA family protein.
  
 
 
 0.787
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.781
CEM62070.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 
 0.778
fliF
Flagellar M-ring protein.
  
  
 0.777
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.