STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61600.1Tetratricopeptide repeat protein. (221 aa)    
Predicted Functional Partners:
CEM61867.1
Tetratricopeptide repeat protein.
 
   
 0.768
CEM62632.1
Tetratricopeptide repeat protein.
 
     0.765
CEM62504.1
Tetratricopeptide repeat protein.
 
   
 0.763
cdsA-2
Phosphatidate cytidylyltransferase.
  
     0.763
CEM62631.1
Tetratricopeptide repeat protein.
 
   
 0.757
CEM61165.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.752
CEM61564.1
Tetratricopeptide repeat protein.
 
   
 0.749
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.748
CEM61172.1
Tetratricopeptide repeat protein.
  
     0.746
CEM62633.1
Tetratricopeptide repeat protein (modular protein).
 
   
 0.739
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.