CEM61605.1 protein (Treponema phagedenis) - STRING interaction network

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Score

CEM61605.1

ABC transporter, ATP-binding protein. (525 aa)

Predicted Functional Partners:

rplU

0.744

rplD

0.741

rpsC

0.736

rpsO

0.730

rpmD

0.728

rplT

0.726

rpmH

0.724

rpsF

0.724

rplM

0.717

rplC

0.716

Your Current Organism:

Treponema phagedenis

NCBI taxonomy Id: 162
Other names: T. phagedenis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEM61605.1	rplC	TPHV1_20142	TPHV1_80034	ABC transporter, ATP-binding protein.	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.716
CEM61605.1	rplD	TPHV1_20142	TPHV1_80033	ABC transporter, ATP-binding protein.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.741
CEM61605.1	rplM	TPHV1_20142	TPHV1_10291	ABC transporter, ATP-binding protein.	50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.717
CEM61605.1	rplT	TPHV1_20142	TPHV1_80070	ABC transporter, ATP-binding protein.	50S ribosomal subunit protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.726
CEM61605.1	rplU	TPHV1_20142	TPHV1_40127	ABC transporter, ATP-binding protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.744
CEM61605.1	rpmD	TPHV1_20142	TPHV1_80017	ABC transporter, ATP-binding protein.	50S ribosomal subunit protein L30; Function of homologous gene experimentally demonstrated in an other organism; structure.	0.728
CEM61605.1	rpmH	TPHV1_20142	TPHV1_10125	ABC transporter, ATP-binding protein.	50S ribosomal protein L34; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL34 family.	0.724
CEM61605.1	rpsC	TPHV1_20142	TPHV1_80028	ABC transporter, ATP-binding protein.	30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.736
CEM61605.1	rpsF	TPHV1_20142	TPHV1_120027	ABC transporter, ATP-binding protein.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.724
CEM61605.1	rpsO	TPHV1_20142	TPHV1_50109	ABC transporter, ATP-binding protein.	30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.730
rplC	CEM61605.1	TPHV1_80034	TPHV1_20142	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ABC transporter, ATP-binding protein.	0.716
rplC	rplD	TPHV1_80034	TPHV1_80033	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplM	TPHV1_80034	TPHV1_10291	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplC	rplT	TPHV1_80034	TPHV1_80070	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal subunit protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.983
rplC	rplU	TPHV1_80034	TPHV1_40127	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.984
rplC	rpmD	TPHV1_80034	TPHV1_80017	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal subunit protein L30; Function of homologous gene experimentally demonstrated in an other organism; structure.	0.995
rplC	rpmH	TPHV1_80034	TPHV1_10125	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L34; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL34 family.	0.903
rplC	rpsC	TPHV1_80034	TPHV1_80028	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.997
rplC	rpsF	TPHV1_80034	TPHV1_120027	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.982
rplC	rpsO	TPHV1_80034	TPHV1_50109	50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.977