Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
lolD-2Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (226 aa)    
Predicted Functional Partners:
CEM61611.1
Efflux ABC transporter, permease protein.
 
 0.988
CEM61613.1
Efflux ABC transporter, permease protein.
 0.987
CEM61225.1
Efflux ABC transporter, permease protein.
 
 0.961
CEM61226.1
Efflux ABC transporter, permease protein.
 
 0.960
CEM61413.1
ABC transporter, ATP-binding protein.
 
    
0.920
CEM61412.1
ABC transporter, ATP-binding protein.
 
    
0.918
oppD-2
Oligopeptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
 
    
0.905
ftsY
Signal recognition particle-docking protein FtsY.
 
   
 0.873
CEM63049.1
ABC transporter, permease protein.
 
 
  
 0.871
CEM61124.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
0.844
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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