Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM61617.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (127 aa)    
Predicted Functional Partners:
CEM61614.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
ftsY
Signal recognition particle-docking protein FtsY.
       0.773
CEM61616.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.773
CEM61609.1
ATP:guanido phosphotransferase, C-terminal catalytic domain protein.
       0.762
CEM61610.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.762
CEM61611.1
Efflux ABC transporter, permease protein.
       0.762
lolD-2
Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
       0.762
CEM61613.1
Efflux ABC transporter, permease protein.
       0.762
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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