Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CEM61640.1Uncharacterized periplasmic metal-binding protein TP_0034; Belongs to the bacterial solute-binding protein 9 family. (309 aa)    
Predicted Functional Partners:
CEM61639.1
Putative metal transport system ATP-binding protein TP_0035; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.988
CEM61638.1
Putative metal transport system membrane protein TP_0036; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.985
troC
Zinc transport system membrane protein TroC.
  
 0.937
troD
Zinc transport system membrane protein TroD.
  
 0.934
troB
Zinc transport system ATP-binding protein TroB.
  
 0.875
CEM61730.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.772
CEM63164.1
CobW/P47K family protein.
  
  
 0.671
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.656
CEM62058.1
Phosphoribosylformylglycinamidine synthase.
     
 0.507
hbpB
Hemin-binding protein B.
  
  
 0.441
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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