Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEM61658.1 | CEM61659.1 | TPHV1_20195 | TPHV1_20196 | Site-specific recombinase, phage integrase family. | DNA-binding helix-turn-helix protein. | 0.609 |
| CEM61658.1 | CEM61701.1 | TPHV1_20195 | TPHV1_20238 | Site-specific recombinase, phage integrase family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.414 |
| CEM61658.1 | CEM62961.1 | TPHV1_20195 | TPHV1_510028 | Site-specific recombinase, phage integrase family. | ComF-like protein. | 0.414 |
| CEM61658.1 | apt | TPHV1_20195 | TPHV1_50029 | Site-specific recombinase, phage integrase family. | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.585 |
| CEM61658.1 | parE | TPHV1_20195 | TPHV1_30206 | Site-specific recombinase, phage integrase family. | DNA topoisomerase 4 subunit B. | 0.455 |
| CEM61658.1 | polA | TPHV1_20195 | TPHV1_80113 | Site-specific recombinase, phage integrase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.417 |
| CEM61658.1 | topA | TPHV1_20195 | TPHV1_110043 | Site-specific recombinase, phage integrase family. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.454 |
| CEM61659.1 | CEM61658.1 | TPHV1_20196 | TPHV1_20195 | DNA-binding helix-turn-helix protein. | Site-specific recombinase, phage integrase family. | 0.609 |
| CEM61701.1 | CEM61658.1 | TPHV1_20238 | TPHV1_20195 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Site-specific recombinase, phage integrase family. | 0.414 |
| CEM61701.1 | apt | TPHV1_20238 | TPHV1_50029 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.694 |
| CEM62961.1 | CEM61658.1 | TPHV1_510028 | TPHV1_20195 | ComF-like protein. | Site-specific recombinase, phage integrase family. | 0.414 |
| CEM62961.1 | apt | TPHV1_510028 | TPHV1_50029 | ComF-like protein. | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.694 |
| apt | CEM61658.1 | TPHV1_50029 | TPHV1_20195 | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Site-specific recombinase, phage integrase family. | 0.585 |
| apt | CEM61701.1 | TPHV1_50029 | TPHV1_20238 | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.694 |
| apt | CEM62961.1 | TPHV1_50029 | TPHV1_510028 | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | ComF-like protein. | 0.694 |
| apt | polA | TPHV1_50029 | TPHV1_80113 | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.477 |
| parE | CEM61658.1 | TPHV1_30206 | TPHV1_20195 | DNA topoisomerase 4 subunit B. | Site-specific recombinase, phage integrase family. | 0.455 |
| parE | polA | TPHV1_30206 | TPHV1_80113 | DNA topoisomerase 4 subunit B. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.642 |
| polA | CEM61658.1 | TPHV1_80113 | TPHV1_20195 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Site-specific recombinase, phage integrase family. | 0.417 |
| polA | apt | TPHV1_80113 | TPHV1_50029 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.477 |
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