STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csdPutative cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (399 aa)    
Predicted Functional Partners:
sufC
Component of SufBCD complex, ATP-binding component of ABC superfamily; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.998
sufB
FeS cluster assembly protein SufB.
 
 0.997
CEM61812.1
SUF system FeS assembly protein, NifU family.
 
 0.997
SufD
SufB/sufD domain protein.
 
 
 0.988
selD
Selenide, water dikinase.
    
 0.912
trxB
Thioredoxin reductase.
  
 
 0.906
CEM60765.1
Endonuclease/exonuclease/phosphatase family protein.
    
   0.649
CEM61581.1
Endonuclease/exonuclease/phosphatase family protein.
    
   0.649
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.596
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.571
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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