STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sudASulfide dehydrogenase subunit alpha. (500 aa)    
Predicted Functional Partners:
sudB
Sulfide dehydrogenase subunit beta.
 
 0.996
gluD
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.937
CEM61144.1
Putative selenate reductase, YgfK subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.931
CEM63088.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.931
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.915
mtnU
Hydrolase MtnU.
  
 0.909
CEM61830.1
Aminotransferase, class I/II.
  
 
 0.907
CEM63087.1
Pyridine nucleotide-disulfide oxidoreductase (fragment).
    
 0.907
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
    
 0.906
glsA
Glutaminase; Belongs to the glutaminase family.
     
 0.901
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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