STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydCATP-binding/permease protein CydC. (577 aa)    
Predicted Functional Partners:
cydD
ATP-binding/permease protein CydD.
 
 
0.997
cydA
Cytochrome bd ubiquinol oxidase subunit 1.
  
 0.993
cydB
Cytochrome bd ubiquinol oxidase subunit 2.
 
  
 0.990
yecC
Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     
0.844
CEM62410.1
Putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.790
potA-2
Polyamine transporter subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.783
pstB
Phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     
0.782
CEM61859.1
Putative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.763
CEM62771.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
     0.724
aapP
Amino-acid transporter subunit; Function of strongly homologous gene; transporter.
 
     
0.583
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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