STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62004.1Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (346 aa)    
Predicted Functional Partners:
CEM62005.1
ABC transporter, ATP-binding protein.
 
 
 0.971
CEM62006.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.909
CEM62003.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.852
CEM62002.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.793
rbsD
Putative cytoplasmic sugar-binding protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.719
CEM61800.1
ABC transporter, ATP-binding protein.
  
 
 0.492
SecE
Protein translocase subunit SecE (modular protein).
  
     0.478
mglB
D-galactose-binding periplasmic protein.
  
 
 0.466
mglB-2
Glucose/galactose-binding lipoprotein.
  
 
 0.466
rbsB
D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.466
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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