STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62026.1D12 class N6 adenine-specific DNA methyltransferase. (372 aa)    
Predicted Functional Partners:
CEM62027.1
Tetratricopeptide repeat protein.
       0.701
nusB
N utilization substance protein B homolog; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.701
tpn39b
Basic membrane protein.
       0.701
CEM62513.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.667
CEM60801.1
Fibronectin type III domain protein.
  
     0.656
CEM61976.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.621
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.597
CEM61592.1
OmpA family protein.
  
     0.594
CEM62025.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.568
CEM61816.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.520
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.