Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM62045.1Flavin reductase. (207 aa)    
Predicted Functional Partners:
CEM62046.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM61428.1
Antigen TyF1; Belongs to the Dps family.
  
  
 0.766
CEM60368.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.709
CEM60657.1
LysM domain protein.
  
 
 0.688
tmpB
Treponemal membrane protein B.
   
  
 0.621
CEM63286.1
LysM domain protein.
   
  
 0.621
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  
 0.591
CEM62047.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.572
adhR
HTH-type transcriptional regulator AdhR (fragment).
  
  
 0.486
CEM61577.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.478
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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