STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62356.1Peptidase, S41 family; Belongs to the peptidase S41A family. (493 aa)    
Predicted Functional Partners:
CEM62358.1
Glycosyltransferase, WecB/TagA/CpsF family.
       0.813
CEM62357.1
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.801
CEM63457.1
Tetratricopeptide repeat protein.
   
 
 0.678
yjdI
Putative Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YjdI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.577
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
   0.562
CEM62589.1
Penicillin-binding protein, 1A family.
  
     0.463
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.