STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62368.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (655 aa)    
Predicted Functional Partners:
whiG
RNA polymerase sigma factor WhiG; Belongs to the sigma-70 factor family.
 
    0.845
CEM62370.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.815
CEM62369.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.800
fliH
Flagellar assembly protein FliH.
 
     0.779
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
     0.753
cheX
Chemotaxis protein CheX.
  
     0.728
CEM61976.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.727
CEM63000.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.694
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
     0.683
CEM62513.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.665
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.