Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CEM62108.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (191 aa)    
Predicted Functional Partners:
fldA
Flavodoxin.
 
     0.932
CEM62058.1
Phosphoribosylformylglycinamidine synthase.
 
  
 0.888
adhE
Fused acetaldehyde-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.868
gapA
Glyceraldehyde-3-phosphate dehydrogenase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.759
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.721
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.718
CEM62560.1
PTS system, beta-glucoside-specific, IIABC component.
  
  
 0.611
CEM61086.1
Alcohol dehydrogenase, iron-dependent.
   
  
 0.596
adh
NADPH-dependent butanol dehydrogenase.
   
  
 0.596
CEM63367.1
Cyclic nucleotide-binding domain protein.
  
  
 0.547
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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