STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62123.1Metallo-beta-lactamase domain protein. (410 aa)    
Predicted Functional Partners:
dfx
Desulfoferrodoxin.
 
  
 0.714
CEM62292.1
Hemerythrin HHE cation binding domain protein.
  
  
 0.682
rbr
Rubrerythrin.
 
  
 0.573
CEM62124.1
Hypothetical protein; No homology to any previously reported sequences.
       0.558
CEM62125.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.424
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.423
msrB
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.416
CEM61090.1
Rubredoxin.
 
  
 0.408
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
   
 0.404
CEM61966.1
Rubredoxin.
  
  
 0.400
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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