Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEM61090.1 | CEM62123.1 | TPHV1_140038 | TPHV1_30018 | Rubredoxin. | Metallo-beta-lactamase domain protein. | 0.408 |
CEM61090.1 | dfx | TPHV1_140038 | TPHV1_80042 | Rubredoxin. | Desulfoferrodoxin. | 0.735 |
CEM61090.1 | nifJ | TPHV1_140038 | TPHV1_50039 | Rubredoxin. | Pyruvate-flavodoxin oxidoreductase. | 0.489 |
CEM61090.1 | rbr | TPHV1_140038 | TPHV1_20182 | Rubredoxin. | Rubrerythrin. | 0.408 |
CEM61966.1 | CEM62123.1 | TPHV1_240016 | TPHV1_30018 | Rubredoxin. | Metallo-beta-lactamase domain protein. | 0.400 |
CEM61966.1 | dfx | TPHV1_240016 | TPHV1_80042 | Rubredoxin. | Desulfoferrodoxin. | 0.777 |
CEM61966.1 | hcp | TPHV1_240016 | TPHV1_80119 | Rubredoxin. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.413 |
CEM61966.1 | msrB | TPHV1_240016 | TPHV1_30166 | Rubredoxin. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.554 |
CEM61966.1 | nifJ | TPHV1_240016 | TPHV1_50039 | Rubredoxin. | Pyruvate-flavodoxin oxidoreductase. | 0.987 |
CEM61966.1 | rbr | TPHV1_240016 | TPHV1_20182 | Rubredoxin. | Rubrerythrin. | 0.501 |
CEM62123.1 | CEM61090.1 | TPHV1_30018 | TPHV1_140038 | Metallo-beta-lactamase domain protein. | Rubredoxin. | 0.408 |
CEM62123.1 | CEM61966.1 | TPHV1_30018 | TPHV1_240016 | Metallo-beta-lactamase domain protein. | Rubredoxin. | 0.400 |
CEM62123.1 | CEM62124.1 | TPHV1_30018 | TPHV1_30019 | Metallo-beta-lactamase domain protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.558 |
CEM62123.1 | CEM62125.1 | TPHV1_30018 | TPHV1_30020 | Metallo-beta-lactamase domain protein. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.424 |
CEM62123.1 | CEM62292.1 | TPHV1_30018 | TPHV1_30187 | Metallo-beta-lactamase domain protein. | Hemerythrin HHE cation binding domain protein. | 0.682 |
CEM62123.1 | dfx | TPHV1_30018 | TPHV1_80042 | Metallo-beta-lactamase domain protein. | Desulfoferrodoxin. | 0.714 |
CEM62123.1 | hcp | TPHV1_30018 | TPHV1_80119 | Metallo-beta-lactamase domain protein. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.404 |
CEM62123.1 | msrB | TPHV1_30018 | TPHV1_30166 | Metallo-beta-lactamase domain protein. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.416 |
CEM62123.1 | nifJ | TPHV1_30018 | TPHV1_50039 | Metallo-beta-lactamase domain protein. | Pyruvate-flavodoxin oxidoreductase. | 0.423 |
CEM62123.1 | rbr | TPHV1_30018 | TPHV1_20182 | Metallo-beta-lactamase domain protein. | Rubrerythrin. | 0.573 |
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