Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM62154.1ABC transporter, permease protein. (310 aa)    
Predicted Functional Partners:
CEM62153.1
ABC transporter, solute-binding protein.
 
 0.999
CEM62155.1
ABC transporter, permease protein.
 
0.999
potA-2
Polyamine transporter subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.995
CEM61455.1
ABC transporter, ATP-binding protein.
 
 0.957
potA
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
 0.944
fbpC
Fe(3+) ions import ATP-binding protein FbpC; Belongs to the ABC transporter superfamily.
 
 0.936
CEM61348.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
   
 0.760
CEM61450.1
ABC transporter, ATP-binding protein.
   
  
 0.624
CEM61456.1
ABC transporter, permease protein.
 
     0.579
CEM62265.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.534
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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