Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM62160.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (479 aa)    
Predicted Functional Partners:
citX
Holo-ACP synthase CitX.
  
  
 0.601
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.528
CEM61058.1
Flavocytochrome c.
 
  
 0.525
CEM62560.1
PTS system, beta-glucoside-specific, IIABC component.
  
  
 0.499
CEM61963.1
Putative Protein-N(pi)-phosphohistidine--sugar phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.475
bdhA
NADH-dependent butanol dehydrogenase A.
       0.458
CEM62159.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
   0.436
CEM62885.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.426
CEM61913.1
Transporter, auxin efflux carrier (AEC) family protein.
  
   0.417
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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