Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM62181.1D12 class N6 adenine-specific DNA methyltransferase (fragment). (158 aa)    
Predicted Functional Partners:
CEM62180.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     0.971
llaDCHIA
Modification methylase LlaDCHIA.
  
  
 
0.925
CEM62244.1
DNA adenine methylase.
  
  
 
0.900
CEM61711.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.895
CEM62182.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.776
CEM62207.1
Integrase core domain protein (modular protein).
  
     0.567
CEM62183.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.535
CEM62192.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.449
CEM62184.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.427
CEM62193.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.424
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: medium (52%) [HD]