STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62207.1Integrase core domain protein (modular protein). (626 aa)    
Predicted Functional Partners:
CEM62206.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.956
CEM62205.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM62208.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM62209.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM62192.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.723
CEM62210.1
Hypothetical protein; No homology to any previously reported sequences.
       0.723
CEM62191.1
Phage protein F-like protein.
 
     0.716
CEM62193.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.600
CEM62181.1
D12 class N6 adenine-specific DNA methyltransferase (fragment).
  
     0.567
CEM60518.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.545
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.