Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CEM62262.1Glycosyl hydrolase, family 18. (351 aa)    
Predicted Functional Partners:
CEM60392.1
Glycosyl hydrolase family 20, catalytic domain protein.
 
  
 0.970
CEM60663.1
Glycosyl hydrolase family 20, catalytic domain protein.
 
  
 0.927
CEM61404.1
Glycosyl hydrolase family 3 N-terminal domain protein.
     
 0.908
CEM62909.1
Glycosyl hydrolase family 3 N-terminal domain protein.
     
 0.908
CEM63469.1
Glycosyl hydrolase family 3 N-terminal domain protein.
     
 0.908
CEM62261.1
Alpha-L-fucosidase.
 
   
 0.880
CEM62263.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM62744.1
Alpha-L-fucosidase.
 
   
 0.613
CEM62955.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.607
CEM62264.1
Chlorophyllase.
  
  
 0.549
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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