Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CEM62293.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. (372 aa)    
Predicted Functional Partners:
CEM62295.1
Response regulator receiver domain protein.
 
 
 0.979
yfiK
Uncharacterized transcriptional regulatory protein YfiK.
 
 
 0.914
CEM63185.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.767
CEM63184.1
ABC-2 type transporter.
 
  
 0.766
CEM63186.1
ABC transporter, ATP-binding protein.
 
   
 0.744
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
 
 0.562
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
 
 0.560
CEM62038.1
7TM diverse intracellular signaling (fragment).
  
 
 0.538
yfiL
Uncharacterized ABC transporter ATP-binding protein YfiL.
 
   
 0.460
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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