close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62310.1ABC transporter, permease protein. (276 aa)    
Predicted Functional Partners:
CEM62309.1
ABC transporter, permease protein.
 0.994
CEM62308.1
ABC transporter, solute-binding protein.
 
 0.986
amyD
Putative starch degradation products transport system permease protein AmyD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.978
ycjV
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.977
CEM61777.1
ABC transporter, permease protein.
  
  
 
0.921
CEM60649.1
ABC transporter, permease protein.
 
 0.916
CEM63056.1
ABC transporter, solute-binding protein.
 
 0.912
CEM61106.1
ABC transporter, permease protein.
 
 0.898
CEM63055.1
ABC transporter, permease protein.
 
 
 0.887
CEM63233.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.868
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.