STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62324.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (116 aa)    
Predicted Functional Partners:
CEM61717.1
Uncharacterized ABC transporter ATP-binding protein HI_0663.
 
     0.776
CEM61718.1
Putative ABC transporter ATP-binding protein HI_0664; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.737
CEM60737.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.734
CEM62325.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.671
CEM62323.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.664
CEM63026.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
      0.660
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.622
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.411
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.