STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpn-2Membrane lipoprotein TpN38(b). (343 aa)    
Predicted Functional Partners:
CEM62506.1
ABC transporter, ATP-binding protein.
 
  
 0.982
CEM62507.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.971
CEM62508.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.970
CEM62509.1
Branched-chain amino acid ABC transporter, permease protein.
 
  
 0.922
yufO
Uncharacterized ABC transporter ATP-binding protein YufO.
 
  
 0.916
yufP
Uncharacterized ABC transporter permease protein YufP; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.857
yufQ
Uncharacterized ABC transporter permease protein YufQ; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.853
CEM62916.1
Basic membrane protein.
  
     0.771
CEM62504.1
Tetratricopeptide repeat protein.
 
     0.614
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.466
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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