Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM62508.1Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (288 aa)    
Predicted Functional Partners:
CEM62506.1
ABC transporter, ATP-binding protein.
 
 
 0.996
CEM62507.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
tpn-2
Membrane lipoprotein TpN38(b).
 
 
 0.995
yufP
Uncharacterized ABC transporter permease protein YufP; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.933
yufO
Uncharacterized ABC transporter ATP-binding protein YufO.
 
  
 0.926
CEM62916.1
Basic membrane protein.
 
  
 0.856
CEM62504.1
Tetratricopeptide repeat protein.
       0.507
mglA-2
Fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
   
 0.481
CEM61800.1
ABC transporter, ATP-binding protein.
 
   
 0.459
CEM62005.1
ABC transporter, ATP-binding protein.
 
   
 0.438
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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