Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cas9Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (591 aa)    
Predicted Functional Partners:
CEM62520.1
CRISPR-associated protein, Csn1 family (fragment).
     0.994
csn1
CRISPR-associated protein, Csn1 family (fragment).
     0.987
CEM62968.1
Transcriptional regulator, Fur family; Belongs to the Fur family.
  
   
 0.454
CEM63405.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.411
CEM61338.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.408
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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