Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM62540.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (687 aa)    
Predicted Functional Partners:
CEM61285.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.774
CEM62541.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.572
CEM62277.1
FtsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.503
CEM62765.1
Fibronectin type III domain protein (modular protein).
  
  
0.487
CEM62018.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
0.484
CEM63385.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
0.468
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
   
 
 0.412
CEM62461.1
TonB-dependent receptor plug domain protein.
    
 
 0.409
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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