STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM62564.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (193 aa)    
Predicted Functional Partners:
CEM62565.1
Hypothetical protein; No homology to any previously reported sequences.
       0.567
CEM60912.1
Peptidase, S54 family.
  
   0.527
CEM61960.1
Peptidase, S54 family.
  
   0.527
CEM63036.1
Outer membrane lipoprotein carrier protein LolA.
    
   0.510
CEM63075.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
    
   0.510
rlpA
Sporulation and cell division repeat protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
 
 0.483
CEM61260.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.416
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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