Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM62591.1Peptidase, M23 family. (306 aa)    
Predicted Functional Partners:
CEM62589.1
Penicillin-binding protein, 1A family.
 
   
 0.801
CEM62592.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM62590.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.740
CEM62048.1
LysM domain protein.
 
   
 0.733
CEM62593.1
Ferredoxin.
       0.689
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
   0.591
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.420
CEM60658.1
Transglycosylase SLT domain protein.
 
   
 0.408
rseP
Putative zinc metalloprotease TP_0600; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.403
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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