Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM62599.1Hypothetical protein; No homology to any previously reported sequences. (79 aa)    
Predicted Functional Partners:
CEM62600.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CEM61226.1
Efflux ABC transporter, permease protein.
  
 
 0.642
lolD
Lipoprotein-releasing system ATP-binding protein LolD.
  
 
 0.564
CEM61227.1
Uncharacterized ABC transporter ATP-binding protein TM_0352.
  
 
 0.564
CEM61293.1
ABC transporter, ATP-binding protein (fragment).
  
 
 0.564
lolD-2
Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.564
yvrO
Uncharacterized ABC transporter ATP-binding protein YvrO.
  
 
 0.564
CEM62612.1
ABC transporter, ATP-binding protein.
  
 
 0.564
CEM63066.1
ABC transporter, ATP-binding protein.
  
 
 0.564
CEM62601.1
Efflux ABC transporter, permease protein.
  
  
0.421
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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