Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CEM62602.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (153 aa)    
Predicted Functional Partners:
CEM62601.1
Efflux ABC transporter, permease protein.
 
     0.919
tpd
34 kDa membrane antigen.
 
 
   0.816
CEM62609.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.797
CEM62611.1
FTR1 family protein.
 
     0.796
CEM62608.1
Efflux ABC transporter, permease protein.
 
     0.782
CEM62607.1
Efflux ABC transporter, permease protein.
 
     0.780
yvrO
Uncharacterized ABC transporter ATP-binding protein YvrO.
 
     0.749
CEM62612.1
ABC transporter, ATP-binding protein.
 
     0.504
CEM62603.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.493
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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